Hi Sami,
as explained in GeoTree Credits section,
country flags come from http://flags.blogpotato.de/
other flags and coats of arms from Wikipedia.
At the moment they are stored in a CSV file :
Code:
GeoNameId URL
3038033 http://upload.wikimedia.org/wikipedia/commons/thumb/7/71/Alzacja_herb.png/100px-Alzacja_herb.png
3037350 http://upload.wikimedia.org/wikipedia/commons/thumb/7/72/Blason_de_l%27Aquitaine_et_de_la_Guyenne.svg/100px-Blason_de_l%27Aquitaine_et_de_la_Guyenne.svg.png
3035876 http://upload.wikimedia.org/wikipedia/commons/thumb/c/c8/Blason_de_l%27Auvergne.svg/100px-Blason_de_l%27Auvergne.svg.png
3030967 http://upload.wikimedia.org/wikipedia/commons/thumb/c/cc/Blason_fr_Bourgogne.svg/100px-Blason_fr_Bourgogne.svg.png
3030293 http://upload.wikimedia.org/wikipedia/commons/thumb/2/26/COA_fr_BRE.svg/100px-COA_fr_BRE.svg.png
3027939 http://upload.wikimedia.org/wikipedia/commons/thumb/2/2d/Blason_Centre.svg/100px-Blason_Centre.svg.png
etc...
Mapping was easy for France using adminCode3/adminCode4 found on wikipedia pages.
Would you like to help us for some other countries ?